Gene information
Official symbol SDC4
Official full name syndecan 4
Gene type protein-coding gene
Chromosome20q13.12
Alias symbolSYND4; amphiglycan; ryudocan
Gene familySyndecans
Resources
Entrez Gene 6385
HGNC HGNC:10661
Ensembl ENSG00000124145
Vega OTTHUMG00000033083
UCSC uc002xnu.4
GO terms: 98 records
GO Description Category LogP Number of genes Detail
GO:0000323 lytic vacuole GO Cellular Components -7.25784656 30 More
GO:0001655 urogenital system development GO Biological Processes -19.5104956 58 More
GO:0001657 ureteric bud development GO Biological Processes -9.01105989 19 More
GO:0001822 kidney development GO Biological Processes -16.2664835 49 More
GO:0001823 mesonephros development GO Biological Processes -9.38463473 20 More
GO:0001838 embryonic epithelial tube formation GO Biological Processes -6.74209917 20 More
GO:0001841 neural tube formation GO Biological Processes -5.20987525 16 More
GO:0001843 neural tube closure GO Biological Processes -4.06290305 13 More
GO:0001934 positive regulation of protein phosphorylation GO Biological Processes -52.8272623 84 More
GO:0001952 regulation of cell-matrix adhesion GO Biological Processes -7.29794194 21 More
GO:0001968 fibronectin binding GO Molecular Functions -9.79576986 9 More
GO:0002009 morphogenesis of an epithelium GO Biological Processes -21.4354199 71 More
GO:0002683 negative regulation of immune system process GO Biological Processes -26.6415063 77 More
GO:0002694 regulation of leukocyte activation GO Biological Processes -32.0887020 60 More
GO:0002695 negative regulation of leukocyte activation GO Biological Processes -9.84552767 31 More
GO:0005080 protein kinase C binding GO Molecular Functions -2.10003506 7 More
GO:0005764 lysosome GO Cellular Components -7.25784656 30 More
GO:0005775 vacuolar lumen GO Cellular Components -10.7475427 18 More
GO:0005796 Golgi lumen GO Cellular Components -14.6918478 18 More
GO:0005925 focal adhesion GO Cellular Components -8.40302345 46 More
GO:0007162 negative regulation of cell adhesion GO Biological Processes -21.5212108 58 More
GO:0008285 negative regulation of cell population proliferation GO Biological Processes -53.5569125 147 More
GO:0009611 response to wounding GO Biological Processes -63.1714102 77 More
GO:0009792 embryo development ending in birth or egg hatching GO Biological Processes -12.9988944 72 More
GO:0010638 positive regulation of organelle organization GO Biological Processes -6.49207636 47 More
GO:0010762 regulation of fibroblast migration GO Biological Processes -4.05681596 5 More
GO:0010810 regulation of cell-substrate adhesion GO Biological Processes -12.3653476 37 More
GO:0014020 primary neural tube formation GO Biological Processes -5.01152693 15 More
GO:0016331 morphogenesis of embryonic epithelium GO Biological Processes -7.49308957 23 More
GO:0019900 kinase binding GO Molecular Functions -6.03057706 62 More
GO:0019901 protein kinase binding GO Molecular Functions -6.66055444 59 More
GO:0021915 neural tube development GO Biological Processes -7.57225811 24 More
GO:0022407 regulation of cell-cell adhesion GO Biological Processes -32.4337382 53 More
GO:0022408 negative regulation of cell-cell adhesion GO Biological Processes -15.9068791 40 More
GO:0030016 myofibril GO Cellular Components -10.5185909 20 More
GO:0030055 cell-substrate junction GO Cellular Components -9.04790297 48 More
GO:0030155 regulation of cell adhesion GO Biological Processes -41.8400792 131 More
GO:0031175 neuron projection development GO Biological Processes -7.36986002 58 More
GO:0032231 regulation of actin filament bundle assembly GO Biological Processes -4.42971140 15 More
GO:0032233 positive regulation of actin filament bundle assembly GO Biological Processes -4.83092272 7 More
GO:0032944 regulation of mononuclear cell proliferation GO Biological Processes -24.6915018 34 More
GO:0032945 negative regulation of mononuclear cell proliferation GO Biological Processes -3.06905273 11 More
GO:0032956 regulation of actin cytoskeleton organization GO Biological Processes -4.25470878 32 More
GO:0032970 regulation of actin filament-based process GO Biological Processes -7.72273150 43 More
GO:0033674 positive regulation of kinase activity GO Biological Processes -29.8538991 87 More
GO:0035148 tube formation GO Biological Processes -7.32029616 23 More
GO:0035239 tube morphogenesis GO Biological Processes -44.2569269 123 More
GO:0042060 wound healing GO Biological Processes -56.2139708 65 More
GO:0042129 regulation of T cell proliferation GO Biological Processes -18.0871480 25 More
GO:0042490 mechanoreceptor differentiation GO Biological Processes -3.67373566 10 More
GO:0043009 chordate embryonic development GO Biological Processes -11.8113315 68 More
GO:0043202 lysosomal lumen GO Cellular Components -6.22272327 10 More
GO:0043292 contractile fiber GO Cellular Components -11.9705216 22 More
GO:0043549 regulation of kinase activity GO Biological Processes -36.8507249 123 More
GO:0044089 positive regulation of cellular component biogenesis GO Biological Processes -10.7794496 56 More
GO:0045121 membrane raft GO Cellular Components -30.0775030 71 More
GO:0045785 positive regulation of cell adhesion GO Biological Processes -29.6368249 50 More
GO:0045859 regulation of protein kinase activity GO Biological Processes -34.3615088 109 More
GO:0045860 positive regulation of protein kinase activity GO Biological Processes -29.3929160 47 More
GO:0048598 embryonic morphogenesis GO Biological Processes -22.1253699 83 More
GO:0048729 tissue morphogenesis GO Biological Processes -31.7796969 96 More
GO:0050670 regulation of lymphocyte proliferation GO Biological Processes -22.6006415 32 More
GO:0050672 negative regulation of lymphocyte proliferation GO Biological Processes -2.56497893 10 More
GO:0050863 regulation of T cell activation GO Biological Processes -20.3209154 36 More
GO:0050865 regulation of cell activation GO Biological Processes -40.6877761 71 More
GO:0050866 negative regulation of cell activation GO Biological Processes -13.9027363 39 More
GO:0051046 regulation of secretion GO Biological Processes -54.0079540 130 More
GO:0051047 positive regulation of secretion GO Biological Processes -32.2282376 71 More
GO:0051249 regulation of lymphocyte activation GO Biological Processes -22.6120519 46 More
GO:0051250 negative regulation of lymphocyte activation GO Biological Processes -7.76846228 25 More
GO:0051347 positive regulation of transferase activity GO Biological Processes -26.6059528 90 More
GO:0051492 regulation of stress fiber assembly GO Biological Processes -3.91249954 13 More
GO:0051493 regulation of cytoskeleton organization GO Biological Processes -3.52271067 40 More
GO:0051495 positive regulation of cytoskeleton organization GO Biological Processes -3.67944181 20 More
GO:0051496 positive regulation of stress fiber assembly GO Biological Processes -3.27167533 5 More
GO:0060113 inner ear receptor cell differentiation GO Biological Processes -3.99478704 10 More
GO:0060122 inner ear receptor cell stereocilium organization GO Biological Processes -1.99235085 5 More
GO:0060341 regulation of cellular localization GO Biological Processes -10.5933083 72 More
GO:0060562 epithelial tube morphogenesis GO Biological Processes -17.7630248 53 More
GO:0060606 tube closure GO Biological Processes -4.01197458 13 More
GO:0070663 regulation of leukocyte proliferation GO Biological Processes -26.8242532 37 More
GO:0070664 negative regulation of leukocyte proliferation GO Biological Processes -3.96184640 13 More
GO:0072001 renal system development GO Biological Processes -17.7796243 52 More
GO:0072073 kidney epithelium development GO Biological Processes -9.16824163 24 More
GO:0072163 mesonephric epithelium development GO Biological Processes -8.91550162 19 More
GO:0072164 mesonephric tubule development GO Biological Processes -8.91550162 19 More
GO:0072175 epithelial tube formation GO Biological Processes -6.28242122 20 More
GO:0098857 membrane microdomain GO Cellular Components -30.8181788 72 More
GO:0110020 regulation of actomyosin structure organization GO Biological Processes -4.68299748 15 More
GO:0110053 regulation of actin filament organization GO Biological Processes -3.93783734 26 More
GO:1901888 regulation of cell junction assembly GO Biological Processes -8.71146171 30 More
GO:1901890 positive regulation of cell junction assembly GO Biological Processes -5.75086352 17 More
GO:1902903 regulation of supramolecular fiber organization GO Biological Processes -5.63791156 37 More
GO:1902905 positive regulation of supramolecular fiber organization GO Biological Processes -5.32876142 22 More
GO:1903037 regulation of leukocyte cell-cell adhesion GO Biological Processes -23.2079690 66 More
GO:1903038 negative regulation of leukocyte cell-cell adhesion GO Biological Processes -10.2281373 27 More
GO:1903530 regulation of secretion by cell GO Biological Processes -45.6472055 114 More
GO:1903532 positive regulation of secretion by cell GO Biological Processes -27.9542102 63 More
KEGG pathways: 4 records
KEGG Description Category LogP Number of genes Detail
hsa04512 ECM-receptor interaction KEGG Pathway -16.8587083 28 More
hsa04514 Cell adhesion molecules KEGG Pathway -5.33785320 11 More
hsa05205 Proteoglycans in cancer KEGG Pathway -18.5545131 27 More
hsa05418 Fluid shear stress and atherosclerosis KEGG Pathway -23.1665561 27 More
Related study: 1 record
Molecular factor Omics type Application Objective MI type Reference
syndecan-4 proteomics myocardial infarction[diagnosis] myocardial infarction Solbu MD et al. Atherosclerosis. 2018
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